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TAF3 Taf3p [ Saccharomyces cerevisiae S288C ]

Gene ID: 856096, updated on 29-Jun-2024

Summary

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Gene symbol
TAF3
Gene description
Taf3p
Primary source
FungiDB:YPL011C
Locus tag
YPL011C
See related
SGD:S000005932; AllianceGenome:SGD:S000005932; VEuPathDB:YPL011C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
TAF47
Summary
Enables chromatin binding activity. Involved in transcription by RNA polymerase II. Part of transcription factor TFIID complex. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See TAF3 in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (533642..534703, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene mitochondrial 37S ribosomal protein MRPS16 Neighboring gene mRNA-binding protein RRP12 Neighboring gene coatomer subunit zeta Neighboring gene Rqc2p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping histone fold TAFs within yeast TFIID. Leurent C, et al. EMBO J, 2002 Jul 1. PMID 12093743, Free PMC Article
  2. Taf2 mediates DNA binding of Taf14. Klein BJ, et al. Nat Commun, 2022 Jun 8. PMID 35676274, Free PMC Article
  3. Genome-wide transcriptional dependence on TAF1 functional domains. Irvin JD, et al. J Biol Chem, 2006 Mar 10. PMID 16407318
  4. A SAGA-independent function of SPT3 mediates transcriptional deregulation in a mutant of the Ccr4-not complex in Saccharomyces cerevisiae. James N, et al. Genetics, 2007 Sep. PMID 17660549, Free PMC Article
  5. Histone folds mediate selective heterodimerization of yeast TAF(II)25 with TFIID components yTAF(II)47 and yTAF(II)65 and with SAGA component ySPT7. Gangloff YG, et al. Mol Cell Biol, 2001 Mar. PMID 11238921, Free PMC Article

See all (52) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables chromatin binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
  
part_of transcription factor TFIID complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Taf3p
NP_015314.1
  • TFIID subunit (47 kDa); involved in promoter binding and RNA polymerase II transcription initiation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    533642..534703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183825.1 → NP_015314.1  TPA: Taf3p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015314.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W401, Q12297
    UniProtKB/TrEMBL
    A0A6A5Q182, A6ZWN5, B3LL51, B5VTF1, C7GU39, C8ZJ16, G2WPG9, N1NXD9
    Conserved Domains (1) summary
    smart00576
    Location:5 → 83
    BTP; Bromodomain transcription factors and PHD domain containing proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12297.1

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