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[ Saccharomyces cerevisiae S288C ]

Gene ID: 856894, updated on 28-Oct-2024

Summary

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Primary source
SGD:S000006754
Locus tag
YNCE0026W
See related
AllianceGenome:SGD:S000006754
Gene type
tRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

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Location:
chromosome: V
Sequence:
Chromosome: V; NC_001137.3 (469457..469530)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene Pea2p Neighboring gene Spi1p Neighboring gene mRNA-binding ubiquitin-specific protease UBP3 Neighboring gene 2-aminoadipate transaminase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Chernyakov I, et al. Genes Dev, 2008 May 15. PMID 18443146, Free PMC Article
  2. Mutation in WDR4 impairs tRNA m(7)G46 methylation and causes a distinct form of microcephalic primordial dwarfism. Shaheen R, et al. Genome Biol, 2015 Sep 28. PMID 26416026, Free PMC Article
  3. tRNA genes and retroelements in the yeast genome. Hani J, et al. Nucleic Acids Res, 1998 Feb 1. PMID 9443958, Free PMC Article
  4. Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. Percudani R, et al. J Mol Biol, 1997 May 2. PMID 9159473
  5. A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. Kumar Y, et al. BMC Genomics, 2013 Jun 17. PMID 23767421, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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  • Valine tRNA (tRNA-Val), predicted by tRNAscan-SE analysis

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables triplet codon-amino acid adaptor activity ISM
Inferred from Sequence Model
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IC
Inferred by Curator
more info
 PubMed 

Gene LinkOut

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