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ECU07_0440 uncharacterized protein [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 859401, updated on 17-May-2024

Summary

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Gene symbol
ECU07_0440
Gene description
uncharacterized protein
Locus tag
ECU07_0440
See related
MicrosporidiaDB:ECU07_0440; VEuPathDB:ECU07_0440
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (isolate: GB-M1)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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See ECU07_0440 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_003234.1 (58176..59648, complement)

Chromosome VII - NC_003234.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003234.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. Peyretaillade E, et al. BMC Genomics, 2009 Dec 15. PMID 20003517, Free PMC Article
  2. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Katinka MD, et al. Nature, 2001 Nov 22. PMID 11719806
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_585972.1
  • 07_0440, unknown, gene found by Glimmer

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003234.1 Reference assembly

    Range
    58176..59648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001041594.1 → NP_585972.1  uncharacterized protein ECU07_0440 [Encephalitozoon cuniculi GB-M1]

    See identical proteins and their annotated locations for NP_585972.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    M1KM00, Q8SV31
    Conserved Domains (2) summary
    cd04493
    Location:268 → 357
    BRCA2DBD_OB1; BRCA2DBD_OB1: A subfamily of OB folds corresponding to the first OB fold (OB1) of the 800-amino acid C-terminal ssDNA binding domain (DBD) of BRCA2 (breast cancer susceptibility gene 2) protein, called BRCA2DBD. BRCA2 participates in homologous ...
    pfam00634
    Location:136 → 167
    BRCA2; BRCA2 repeat
Nucleotide Protein
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