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NAEGRDRAFT_58970 glutamine amidotransferase [ Naegleria gruberi ]

Gene ID: 8864469, updated on 17-May-2024

Summary

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Gene symbol
NAEGRDRAFT_58970
Gene description
glutamine amidotransferase
Locus tag
NAEGRDRAFT_58970
See related
AmoebaDB:NAEGRDRAFT_58970; VEuPathDB:NAEGRDRAFT_58970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Naegleria gruberi (strain: NEG-M)
Lineage
Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia; Vahlkampfiidae; Naegleria
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Genomic context

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See NAEGRDRAFT_58970 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003163281.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nuclear pore complex p62 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003163281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Fritz-Laylin LK, et al. Cell, 2010 Mar 5. PMID 20211133
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GMP synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GMP synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamine amidotransferase
XP_002673466.1
  • Significant similarity to known glutamine amidotransferases. Contains PFAM Glutamine amidotransferase domains (PF00117 and PF00958). Potentially a GMP synthase).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003163281.1 Reference assembly

    Range
    165202..166878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002673420.1 → XP_002673466.1  glutamine amidotransferase [Naegleria gruberi]

    See identical proteins and their annotated locations for XP_002673466.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D2VQZ1
    Conserved Domains (3) summary
    cd01742
    Location:35 → 236
    GATase1_GMP_Synthase; Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase
    PRK00074
    Location:32 → 558
    guaA; GMP synthase; Reviewed
    cd01997
    Location:267 → 557
    GMP_synthase_C; The C-terminal domain of GMP synthetase. It contains two subdomains; the ATP pyrophosphatase domain which closes to the N-termial and the dimerization domain at C-terminal end. The ATP-PPase is a twisted, five-stranded parallel beta-sheet sandwiched ...
Nucleotide Protein
Heading Accession and Version

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