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PWR1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164905, updated on 2-Nov-2024

Summary

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Official Symbol
PWR1
Primary source
SGD:S000132614
Locus tag
YNCI0013W
See related
AllianceGenome:SGD:S000132614
Gene type
ncRNA
RNA name
other
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See PWR1 in Genome Data Viewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (395999..396939)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Flo11p Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Mrs1p Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Single-cell analysis reveals that noncoding RNAs contribute to clonal heterogeneity by modulating transcription factor recruitment. Bumgarner SL, et al. Mol Cell, 2012 Feb 24. PMID 22264825, Free PMC Article
  2. Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast. Bumgarner SL, et al. Proc Natl Acad Sci U S A, 2009 Oct 27. PMID 19805129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • Intergenic regulatory ncRNA; one of two long ncRNAs that play key roles in regulating transcription of the nearby protein-coding ORF FLO11; PWR1 promotes FLO11 transcription by interfering with ncRNA ICR1, which is transcribed across the FLO11 promoter

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IC
Inferred by Curator
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    395999..396939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132192.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials