U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNR36 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164972, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
SNR36
Primary source
SGD:S000007300
Locus tag
YNCO0022C
See related
AllianceGenome:SGD:S000007300
Gene type
ncRNA
RNA name
snoRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables rRNA pseudouridylation guide activity. Involved in rRNA pseudouridine synthesis. Part of box H/ACA snoRNP complex. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SNR36 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (680685..680866, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Fyv12p Neighboring gene O-phospho-L-serine:2-oxoglutarate transaminase Neighboring gene Ran GTPase GSP2 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAs. Bortolin ML, et al. EMBO J, 1999 Jan 15. PMID 9889201, Free PMC Article
  2. Characterization of three new snRNAs from Saccharomyces cerevisiae: snR34, snR35 and snR36. Samarsky DA, et al. Nucleic Acids Res, 1995 Jul 11. PMID 7630735, Free PMC Article
  3. Loss of rRNA modifications in the decoding center of the ribosome impairs translation and strongly delays pre-rRNA processing. Liang XH, et al. RNA, 2009 Sep. PMID 19628622, Free PMC Article
  4. Genetic interactions show the importance of rRNA modification machinery for the role of Rps15p during ribosome biogenesis in S. cerevisiae. Bellemer C, et al. PLoS One, 2010 May 3. PMID 20454621, Free PMC Article
  5. Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Ganot P, et al. Cell, 1997 May 30. PMID 9182768

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
  • H/ACA box small nucleolar RNA (snoRNA); guides pseudouridylation of small subunit (SSU) rRNA at position U1187

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables rRNA pseudouridylation guide activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA pseudouridine synthesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of box H/ACA snoRNP complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in nucleolus IC
Inferred by Curator
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    680685..680866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132260.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials