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SNR35 [ Saccharomyces cerevisiae S288C ]

Gene ID: 9164977, updated on 2-Nov-2024

Summary

Official Symbol
SNR35
Primary source
SGD:S000007299
Locus tag
YNCO0024C
See related
AllianceGenome:SGD:S000007299
Gene type
ncRNA
RNA name
snoRNA
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable rRNA pseudouridylation guide activity. Predicted to be involved in snoRNA guided rRNA pseudouridine synthesis. Located in nucleolus. Part of box H/ACA snoRNP complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See SNR35 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (759326..759529, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene [acyl-carrier-protein] S-malonyltransferase Neighboring gene mitochondrial 2-oxodicarboxylate carrier Neighboring gene Dsc3p Neighboring gene DNA-directed RNA polymerase core subunit RPB8

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

  • H/ACA box small nucleolar RNA (snoRNA); predicted to guide pseudouridylation of small subunit (SSU) rRNA at position 1191

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables rRNA pseudouridylation guide activity ISM
Inferred from Sequence Model
more info
PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in snoRNA guided rRNA pseudouridine synthesis ISM
Inferred from Sequence Model
more info
PubMed 
Component Evidence Code Pubs
part_of box H/ACA snoRNP complex IPI
Inferred from Physical Interaction
more info
PubMed 
located_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    759326..759529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132261.1 RNA Sequence

    Status: REVIEWED