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PY770_RS04290 GIY-YIG nuclease family protein [ Fructilactobacillus sanfranciscensis ]

Gene ID: 93160715, updated on 27-Aug-2024

Summary

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Gene symbol
PY770_RS04290
Gene description
GIY-YIG nuclease family protein
Locus tag
PY770_RS04290
Gene type
protein coding
Organism
Fructilactobacillus sanfranciscensis (strain: SPC-SNU-70-4)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Fructilactobacillus
Old locus tag
PY770_04290
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Genomic context

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NZ_CP118925.1Genomic Context describing neighboring genes Neighboring gene translation elongation factor Ts Neighboring gene 30S ribosomal protein S2 Neighboring gene tRNA1(Val) (adenine(37)-N6)-methyltransferase Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase Neighboring gene YneF family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP118925.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Catalytic domain structure and hypothesis for function of GIY-YIG intron endonuclease I-TevI. Van Roey P, et al. Nat Struct Biol, 2002 Nov. PMID 12379841
  2. Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings. Kowalski JC, et al. Nucleic Acids Res, 1999 May 15. PMID 10219084, Free PMC Article
  3. Conserved domains in DNA repair proteins and evolution of repair systems. Aravind L, et al. Nucleic Acids Res, 1999 Mar 1. PMID 9973609, Free PMC Article
  4. Identification of a family of bacteriophage T4 genes encoding proteins similar to those present in group I introns of fungi and phage. Sharma M, et al. Proc Natl Acad Sci U S A, 1992 Jul 15. PMID 1631169, Free PMC Article
  5. Phylogenomic analysis of the GIY-YIG nuclease superfamily. Dunin-Horkawicz S, et al. BMC Genomics, 2006 Apr 28. PMID 16646971, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
GIY-YIG nuclease family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP118925.1 Reference assembly

    Range
    851402..851683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_014082097.1 GIY-YIG nuclease family protein [Fructilactobacillus sanfranciscensis]

    See identical proteins and their annotated locations for WP_014082097.1

    UniProtKB/TrEMBL
    A0A5C4TJX8, G2KUD0
Nucleotide Protein
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