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lipC spore coat phospholipase B [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938249, updated on 6-Oct-2023

Summary

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Gene symbol
lipC
Gene description
spore coat phospholipase B
Locus tag
BSU_04110
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU04110
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Genomic context

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Sequence:
NC_000964.3 (462431..463072)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-5-oxoprolinase (ATP-dependent) subunit C Neighboring gene transcriptional regulator of the pxp operon (IclR family) Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination. Masayama A, et al. J Bacteriol, 2007 Mar. PMID 17220230, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. We propose that ycsK should be renamed lipC. This is the first study of a bacterial spore germination-related lipase. [LipC]
    Title: A novel lipolytic enzyme, YcsK (LipC), located in the spore coat of Bacillus subtilis, is involved in spore germination.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
spore coat phospholipase B
NP_388292.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 9334321, 17220230, 20057119; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388292.1 spore coat phospholipase B [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388292.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KPJ0
    Conserved Domains (1) summary
    COG2755
    Location:4 → 211
    TesA; Lysophospholipase L1 or related esterase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42969.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials