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clpC ATP-dependent clp protease ATP-binding subunit [ Durinskia baltica ]

Gene ID: 9385527, updated on 27-Jan-2017

Summary

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Gene symbol
clpC
Gene description
ATP-dependent clp protease ATP-binding subunit
Locus tag
DUBAC_pgp127
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Durinskia baltica (strain: CS-38)
Lineage
Eukaryota; Alveolata; Dinophyceae; Peridiniales; Peridiniaceae; Durinskia
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Genomic context

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Sequence:
NC_014287.1 (106615..109350)

NC_014287.1Genomic Context describing neighboring genes Neighboring gene tRNA-Cys Neighboring gene tRNA-Leu Neighboring gene truncated cytochrome c biogenesis protein Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014287.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete plastid genomes of the two 'dinotoms' Durinskia baltica and Kryptoperidinium foliaceum. Imanian B, et al. PLoS One, 2010 May 19. PMID 20502706, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Names
ATP-dependent clp protease ATP-binding subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014287.1 Reference assembly

    Range
    106615..109350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003735076.1 ATP-dependent clp protease ATP-binding subunit (chloroplast) [Durinskia baltica]

    See identical proteins and their annotated locations for YP_003735076.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D7PJ93
    Conserved Domains (5) summary
    cd00009
    Location:193 → 345
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    CHL00095
    Location:1 → 864
    clpC; Clp protease ATP binding subunit
    pfam02861
    Location:91 → 143
    Clp_N; Clp amino terminal domain, pathogenicity island component
    pfam07724
    Location:553 → 745
    AAA_2; AAA domain (Cdc48 subfamily)
    pfam10431
    Location:752 → 832
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
Nucleotide Protein
Heading Accession and Version