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ybjC DUF1418 domain-containing protein YbjC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945481, updated on 10-Oct-2024

Summary

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Official Symbol
ybjC
Official Full Name
DUF1418 domain-containing protein YbjC
Primary source
ECOCYC:EG12842
Locus tag
b0850
See related
ASAP:ABE-0002898
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0841
Summary
The nfsA and ybjC genes are co-transcribed . [More information is available at EcoCyc: EG12842].
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Genomic context

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Sequence:
NC_000913.3 (890913..891200)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein Neighboring gene reduced glutaredoxin 1 Neighboring gene NADPH-dependent nitro/quinone reductase NfsA Neighboring gene ribosomal protein S6 modification protein Neighboring gene protein YbjN

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNA microarray of global transcription factor mutant reveals membrane-related proteins involved in n-butanol tolerance in Escherichia coli. Si HM, et al. Biotechnol Biofuels, 2016. PMID 27252779, Free PMC Article
  2. Cloning and expression of the glutaredoxin (grx) gene of Escherichia coli. Höög JO, et al. Gene, 1986. PMID 3530878
  3. Adapted tolerance to benzalkonium chloride in Escherichia coli K-12 studied by transcriptome and proteome analyses. Bore E, et al. Microbiology (Reading), 2007 Apr. PMID 17379704
  4. Regulation of the nfsA Gene in Escherichia coli by SoxS. Paterson ES, et al. J Bacteriol, 2002 Jan. PMID 11741843, Free PMC Article
  5. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within response to butan-1-ol IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to paraquat IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
DUF1418 domain-containing protein YbjC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    890913..891200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415371.1 DUF1418 domain-containing protein YbjC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415371.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAN5K8W7
    Conserved Domains (1) summary
    cl11648
    Location:1 → 93
    DUF1418; Protein of unknown function (DUF1418)
Nucleotide Protein
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