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xisE putative excisionase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945705, updated on 19-Sep-2024

Summary

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Official Symbol
xisE
Official Full Name
putative excisionase
Primary source
ECOCYC:G6585
Locus tag
b1141
See related
ASAP:ABE-0003838
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1127; ymfG
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Genomic context

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Sequence:
NC_000913.3 (1200787..1201032, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein YmfE Neighboring gene cell death peptidase Lit Neighboring gene putative integrase Neighboring gene putative protein YmfH Neighboring gene uncharacterized protein YmfI Neighboring gene uncharacterized protein YmfJ

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
  2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative excisionase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1200787..1201032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415659.1 putative excisionase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415659.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P75970
    Conserved Domains (1) summary
    pfam07825
    Location:5 → 75
    Exc; Excisionase-like protein
Nucleotide Protein
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