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TRVs2gp1 22.3K [ Tobacco rattle virus ]

Gene ID: 962133, updated on 18-Aug-2023

Summary

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Gene symbol
TRVs2gp1
Gene description
22.3K
Locus tag
TRVs2gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tobacco rattle virus (isolate: PPK20)
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Virgaviridae; Tobravirus
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Genomic context

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Location:
clone: pK20, segment: RNA 2
Sequence:
NC_003811.1 (557..1171)

NC_003811.1Genomic Context describing neighboring genes Neighboring gene 28.7K Neighboring gene 32.8K

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003811.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Yeast two-hybrid study of tobacco rattle virus coat protein and 2b protein interactions. Holeva RC, et al. Arch Virol, 2006 Nov. PMID 16763731
  2. Sequence of RNA 2 of a nematode-transmissible isolate of tobacco rattle virus. Hernández C, et al. J Gen Virol, 1995 Nov. PMID 7595393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
22.3K
NP_620682.1
  • High homology with other tobraviral coat proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003811.1 Reference assembly

    Range
    557..1171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_620682.1 22.3K [Tobacco rattle virus]

    See identical proteins and their annotated locations for NP_620682.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q88897
    UniProtKB/TrEMBL
    A0A6N3ITA2
    Conserved Domains (1) summary
    pfam00721
    Location:7 → 175
    TMV_coat; Virus coat protein (TMV like)
Nucleotide Protein
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