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LOC9631749 glucose-6-phosphate isomerase 1, chloroplastic [ Selaginella moellendorffii ]

Gene ID: 9631749, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9631749
Gene description
glucose-6-phosphate isomerase 1, chloroplastic
Locus tag
SELMODRAFT_147101
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9631749 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314275.1 (1610264..1613026)

NW_003314275.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 18 Neighboring gene RNA polymerase sigma factor SigA2 Neighboring gene expansin-B3 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transmembrane protein 45B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314275 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate derivative binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucose-6-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucose-6-phosphate isomerase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314275.1 Reference v1.0

    Range
    1610264..1613026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002970264.2 → XP_002970310.2  glucose-6-phosphate isomerase 1, chloroplastic isoform X1

    UniProtKB/TrEMBL
    D8S5I4
    Conserved Domains (1) summary
    PRK14096
    Location:66 → 601
    pgi; glucose-6-phosphate isomerase; Provisional

  2. XM_024675061.1 → XP_024530829.1  glucose-6-phosphate isomerase 1, chloroplastic isoform X2

    UniProtKB/TrEMBL
    D8RGX3
    Conserved Domains (1) summary
    cl28156
    Location:4 → 435
    PGI; Phosphoglucose isomerase
Nucleotide Protein
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