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LOC9643303 tubulin alpha chain [ Selaginella moellendorffii ]

Gene ID: 9643303, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9643303
Gene description
tubulin alpha chain
Locus tag
SELMODRAFT_404672
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9643303 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314263.1 (3808483..3810038, complement)

NW_003314263.1Genomic Context describing neighboring genes Neighboring gene SCY1-like protein 2 Neighboring gene tubulin alpha chain Neighboring gene AP-3 complex subunit sigma Neighboring gene uncharacterized LOC9661590 Neighboring gene rho GDP-dissociation inhibitor 1 Neighboring gene trafficking protein particle complex II-specific subunit 120 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314263 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314263.1 Reference v1.0

    Range
    3808483..3810038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002963047.1 → XP_002963093.1  tubulin alpha chain

    See identical proteins and their annotated locations for XP_002963093.1

    UniProtKB/TrEMBL
    D8QVP0, D8QW19
    Conserved Domains (2) summary
    PLN00221
    Location:1 → 440
    PLN00221; tubulin alpha chain; Provisional
    cd02186
    Location:2 → 435
    alpha_tubulin; The alpha-tubulin family
Nucleotide Protein
Heading Accession and Version

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