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    LOC100420765 leucine rich pentatricopeptide repeat containing pseudogene [ Homo sapiens (human) ]

    Gene ID: 100420765, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC100420765
    Gene description
    leucine rich pentatricopeptide repeat containing pseudogene
    See related
    Ensembl:ENSG00000258505
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC100420765 in Genome Data Viewer
    Location:
    14q21.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (42608868..42609565)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (36799729..36800426)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (43078071..43078768)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903305 Neighboring gene olfactory receptor family 10 subfamily V member 7 pseudogene Neighboring gene Sharpr-MPRA regulatory region 9782 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:42804851-42805576 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:42847859-42848402 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:42848403-42848946 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:43133320-43133895 Neighboring gene NANOG hESC enhancer GRCh37_chr14:43341948-43342457 Neighboring gene YWHAQ pseudogene 1 Neighboring gene uncharacterized LOC124903306

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_027353.1 

      Range
      101..798
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      42608868..42609565
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      36799729..36800426
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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