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    SOX30P1 SOX30 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 442142, updated on 10-Oct-2023

    Summary

    Official Symbol
    SOX30P1provided by HGNC
    Official Full Name
    SOX30 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:35122
    See related
    AllianceGenome:HGNC:35122
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See SOX30P1 in Genome Data Viewer
    Location:
    5q33.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (157689926..157691254, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (158208952..158210280, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (157116934..157118262, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 30 Neighboring gene uncharacterized LOC105377675 Neighboring gene Sharpr-MPRA regulatory region 8057 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:157098206-157098763 Neighboring gene chromosome 5 open reading frame 52 Neighboring gene Sharpr-MPRA regulatory region 5199 Neighboring gene uncharacterized LOC105377676 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23529 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23530 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23531 Neighboring gene tRNA-histidine guanylyltransferase 1 like

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_028192.3 

      Range
      101..1429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      157689926..157691254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      158208952..158210280 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)