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    EXTL2P1 exostosin like glycosyltransferase 2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100287682, updated on 17-Sep-2024

    Summary

    Official Symbol
    EXTL2P1provided by HGNC
    Official Full Name
    exostosin like glycosyltransferase 2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:3517
    See related
    AllianceGenome:HGNC:3517
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    EXTL2P
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    Genomic context

    See EXTL2P1 in Genome Data Viewer
    Location:
    2q31.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (175842887..175843498)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (176330952..176331563)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (176707615..176708226)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373752 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:176328833-176329307 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:176342216-176343415 Neighboring gene MPRA-validated peak3942 silencer Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:176458063-176458822 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:176458823-176459580 Neighboring gene uncharacterized LOC107985962 Neighboring gene Sharpr-MPRA regulatory region 1697 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:176608583-176609206 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:176624132-176624664 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:176651769-176652968 Neighboring gene MPRA-validated peak3944 silencer Neighboring gene MPRA-validated peak3945 silencer Neighboring gene uncharacterized LOC124907909 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:176699169-176699670 Neighboring gene lunapark, ER junction formation factor Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16788 Neighboring gene thymosin beta-4-like

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Whole genome association scan for genetic polymorphisms influencing information processing speed.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016787.2 

      Range
      101..712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      175842887..175843498
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      176330952..176331563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)