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    YTHDF3P1 YTHDF3 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 127379726, updated on 28-Oct-2024

    Summary

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    Official Symbol
    YTHDF3P1provided by HGNC
    Official Full Name
    YTHDF3 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:56498
    See related
    Ensembl:ENSG00000243072 AllianceGenome:HGNC:56498
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See YTHDF3P1 in Genome Data Viewer
    Location:
    3q21.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (125679573..125679781)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (128406175..128406383)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (125398417..125398625)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene sorting nexin 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20430 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:125238317-125238818 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14667 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20431 Neighboring gene oxysterol binding protein like 11 Neighboring gene HNF1 motif-containing MPRA enhancer 180 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20432 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20433 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14668 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20434 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:125390028-125390702 Neighboring gene uncharacterized LOC100419966 Neighboring gene MYLK pseudogene 2 Neighboring gene olfactory receptor family 7 subfamily E member 130 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See Variation Viewer (GRCh37.p13)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_115714.1 

      Range
      101..309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      125679573..125679781
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187537.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      14055..14263
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      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      128406175..128406383
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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