U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CABYRP1 calcium binding tyrosine phosphorylation regulated pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 266954, updated on 17-Jun-2024

    Summary

    Official Symbol
    CABYRP1provided by HGNC
    Official Full Name
    calcium binding tyrosine phosphorylation regulated pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:31902
    See related
    Ensembl:ENSG00000242983 AllianceGenome:HGNC:31902
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CABYRP
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CABYRP1 in Genome Data Viewer
    Location:
    3p21.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (54047660..54048865, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (54081514..54082719, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (54081687..54082892, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:53925074-53925974 Neighboring gene selenoprotein K Neighboring gene NANOG hESC enhancer GRCh37_chr3:54014583-54015161 Neighboring gene uncharacterized LOC105377095 Neighboring gene uncharacterized LOC124909381 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:54121379-54121902 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:54121903-54122425 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14470 Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 3 Neighboring gene Sharpr-MPRA regulatory region 13251 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54237261-54237762 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:54246728-54247322 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54250734-54251234 Neighboring gene NANOG hESC enhancer GRCh37_chr3:54262808-54263341 Neighboring gene uncharacterized LOC124909382 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:54319420-54319921

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • calcium binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) pseudogene
    • calcium binding tyrosine-(Y)-phosphorylation regulated pseudogene 1
    • calcium-binding tyrosine phosphorylation-regulated protein pseudogene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002394.6 

      Range
      101..1306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      54047660..54048865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      54081514..54082719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)