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    LIMK2P1 LIMK2 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 139952, updated on 17-Sep-2024

    Summary

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    Official Symbol
    LIMK2P1provided by HGNC
    Official Full Name
    LIMK2 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:54893
    See related
    Ensembl:ENSG00000223418 AllianceGenome:HGNC:54893
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LIMK2P1 in Genome Data Viewer
    Location:
    Xp22.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (11704246..11705613, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (11286793..11288160, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (11722366..11723733, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 6 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20658 Neighboring gene GOT2 pseudogene 7 Neighboring gene Sharpr-MPRA regulatory region 12383 Neighboring gene uncharacterized LOC124905246 Neighboring gene NFE2L2 motif-containing MPRA enhancer 58 Neighboring gene Sharpr-MPRA regulatory region 13392 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:11583538-11584150 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:11584151-11584762 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20659 Neighboring gene NANOG hESC enhancer GRCh37_chrX:11699422-11699959 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:11722255-11722754 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:11722771-11723272 Neighboring gene uncharacterized LOC105373131 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20660 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20661 Neighboring gene MSL3 divergent transcript

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • LIM domain kinase 2 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022582.2 

      Range
      101..1468
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      11704246..11705613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      11286793..11288160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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