U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC401875 differentially expressed in FDCP 8 homolog (mouse) pseudogene [ Homo sapiens (human) ]

    Gene ID: 401875, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC401875
    Gene description
    differentially expressed in FDCP 8 homolog (mouse) pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC401875 in Genome Data Viewer
    Location:
    17p11.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (20612536..20613167)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (20561173..20561804)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20515849..20516480)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:20487547-20488084 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:20489421-20489620 Neighboring gene zinc finger SWIM-type containing 5 pseudogene 2 Neighboring gene Meis homeobox 3 pseudogene 2 Neighboring gene long intergenic non-protein coding RNA 2088 Neighboring gene ribosomal protein S6 kinase B1 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:20543293-20543793 Neighboring gene uncharacterized LOC105371583 Neighboring gene cytospin B pseudogene Neighboring gene LCR17pD recombination region Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11869 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:20601656-20602156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:20602157-20602657 Neighboring gene ring finger protein, transmembrane 1 pseudogene 3

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022461.2 

      Range
      81..712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      20612536..20613167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      20561173..20561804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)