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    RFC5P1 replication factor C 5 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100421549, updated on 17-Jun-2024

    Summary

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    Official Symbol
    RFC5P1provided by HGNC
    Official Full Name
    replication factor C 5 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:50450
    See related
    AllianceGenome:HGNC:50450
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See RFC5P1 in Genome Data Viewer
    Location:
    9q21.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (77072678..77073292)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (89229165..89229779)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (79687594..79688208)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376096 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:79652960-79653618 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:79653619-79654276 Neighboring gene MPRA-validated peak7269 silencer Neighboring gene ATP synthase membrane subunit f pseudogene 3 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:79694935-79696134 Neighboring gene forkhead box B2 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr9:79702393-79702975 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:79743283-79743791 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:79743792-79744300 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:79744301-79744809 Neighboring gene Sharpr-MPRA regulatory region 10899 Neighboring gene Sharpr-MPRA regulatory region 12012 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:79793446-79793615 Neighboring gene VPS13A antisense RNA 1 Neighboring gene vacuolar protein sorting 13 homolog A Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:79882068-79883068 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:79883069-79884068 Neighboring gene Sharpr-MPRA regulatory region 5552 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28483 Neighboring gene uncharacterized LOC124902185 Neighboring gene GNA14 antisense RNA 1 Neighboring gene G protein subunit alpha 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • replication factor C (activator 1) 5, 36.5kDa pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_023928.1 

      Range
      101..715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      77072678..77073292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      89229165..89229779
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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