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    SOX5P1 SOX5 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 6661, updated on 17-Sep-2024

    Summary

    Official Symbol
    SOX5P1provided by HGNC
    Official Full Name
    SOX5 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:11202
    See related
    AllianceGenome:HGNC:11202
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SOX29; SOX5P
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    Genomic context

    See SOX5P1 in Genome Data Viewer
    Location:
    8q21.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (87788224..87789710, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (88911583..88913069, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (88800452..88801938, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr8:88619915-88620639 Neighboring gene uncharacterized LOC105375626 Neighboring gene IARS2 pseudogene 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:88637362-88637934 Neighboring gene NANOG hESC enhancer GRCh37_chr8:88763590-88764091 Neighboring gene zinc finger protein 773 pseudogene Neighboring gene DDB1 and CUL4 associated factor 4 like 2

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002726.5 

      Range
      101..1587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      87788224..87789710 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      88911583..88913069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)