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    LOC100422627 TATA-box binding protein associated factor 4b pseudogene [ Homo sapiens (human) ]

    Gene ID: 100422627, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100422627
    Gene description
    TATA-box binding protein associated factor 4b pseudogene
    See related
    Ensembl:ENSG00000234841
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC100422627 in Genome Data Viewer
    Location:
    4q25
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (112826302..112827723)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (116134653..116136074)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (113747458..113748879)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene eukaryotic translation initiation factor 2 subunit gamma pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15643 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:113738957-113739482 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:113739483-113740006 Neighboring gene ribosomal protein L7a pseudogene 30 Neighboring gene uncharacterized LOC102723896 Neighboring gene Sharpr-MPRA regulatory region 8329 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:113879232-113879899 Neighboring gene uncharacterized LOC124900761 Neighboring gene NANOG hESC enhancer GRCh37_chr4:113945514-113946051

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_025242.2 

      Range
      101..1522
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      112826302..112827723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      116134653..116136074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)