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    LOC100129942 capping actin protein of muscle Z-line subunit alpha 2 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100129942, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100129942
    Gene description
    capping actin protein of muscle Z-line subunit alpha 2 pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC100129942 in Genome Data Viewer
    Location:
    15q26.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (88989222..88990308, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (86744118..86745204, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (89532453..89533539, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10037 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10038 Neighboring gene MPRA-validated peak2417 silencer Neighboring gene keratin 18 pseudogene 47 Neighboring gene MPRA-validated peak2418 silencer Neighboring gene CRISPRi-validated cis-regulatory element chr15.3128 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3129 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89536398-89537299 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr15:89542092-89542895 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89545400-89546011 Neighboring gene Sharpr-MPRA regulatory region 4646 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89547127-89547627 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:89574853-89575354 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89592211-89592762 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89602566-89603066 Neighboring gene coronary artery disease region linked MFGE8 regulatory lncRNA Neighboring gene abhydrolase domain containing 2, acylglycerol lipase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10039 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10040 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89630450-89631095 Neighboring gene uncharacterized LOC124903573 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:89631827-89632346 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr15:89644900-89646099

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022117.3 

      Range
      101..1187
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      88989222..88990308 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      86744118..86745204 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)