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    H2ACP1 H2AC histone family pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100509927, updated on 17-Sep-2024

    Summary

    Official Symbol
    H2ACP1provided by HGNC
    Official Full Name
    H2AC histone family pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:42647
    See related
    Ensembl:ENSG00000223383 AllianceGenome:HGNC:42647
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HIST1H2APS6
    Summary
    Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 13. [provided by RefSeq, Oct 2015]
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    Genomic context

    See H2ACP1 in Genome Data Viewer
    Location:
    13q13.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (36490050..36490441, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (35709576..35709968, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (37064187..37064578, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene spartin Neighboring gene SPART antisense RNA 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr13:36962882-36963065 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5264 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5265 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5266 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr13:37011626-37012825 Neighboring gene cyclin A1 Neighboring gene OCT4-H3K4me1 hESC enhancer GRCh37_chr13:37101466-37101966 Neighboring gene uncharacterized LOC124903155 Neighboring gene uncharacterized LOC124903157

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • HIST1H2A pseudogene 6
    • histone cluster 1 H2A pseudogene 6
    • histone cluster 1, H2a pseudogene
    • histone cluster 1, H2a, pseudogene 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_029174.1 

      Range
      101..492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      36490050..36490441 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      35709576..35709968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)