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    ANKRD36BP1 ankyrin repeat domain 36B pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 84832, updated on 17-Sep-2024

    Summary

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    Official Symbol
    ANKRD36BP1provided by HGNC
    Official Full Name
    ankyrin repeat domain 36B pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:28169
    See related
    Ensembl:ENSG00000293109 AllianceGenome:HGNC:28169
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRD26L1; ANKRD36BL1
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    Genomic context

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    See ANKRD36BP1 in Genome Data Viewer
    Location:
    1q24.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (168245565..168247430, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (167597066..167598932, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (168214803..168216668, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene ribosomal protein L34 pseudogene 1 Neighboring gene CRISPRi-validated cis-regulatory element chr1.9777 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:168195163-168195896 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2058 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2059 Neighboring gene SFT2 domain containing 2 Neighboring gene RNA, U6 small nuclear 1310, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:168239605-168240105 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168254423-168254924 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:168260049-168260620 Neighboring gene T-box transcription factor 19

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gsk3β and Tomm20 are substrates of the SCFFbxo7/PARK15 ubiquitin ligase associated with Parkinson's disease. Teixeira FR, et al. Biochem J, 2016 Oct 15. PMID 27503909, Free PMC Article
    2. Towards a proteome-scale map of the human protein-protein interaction network. Rual JF, et al. Nature, 2005 Oct 20. PMID 16189514
    3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. Oláh J, et al. J Biol Chem, 2011 Sep 30. PMID 21832049, Free PMC Article
    4. VIRMA mediates preferential m(6)A mRNA methylation in 3'UTR and near stop codon and associates with alternative polyadenylation. Yue Y, et al. Cell Discov, 2018. PMID 29507755, Free PMC Article
    5. A proteome-scale map of the human interactome network. Rolland T, et al. Cell, 2014 Nov 20. PMID 25416956, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • ankyrin repeat domain 26-like 1
    • ankyrin repeat domain 36B-like 1 (pseudogene)

    Clone Names

    • MGC12538

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026844.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC007072, DA219755, DA246884, DB229590
      Related
      ENST00000358576.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      168245565..168247430 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      167597066..167598932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_032746.1: Suppressed sequence

      Description
      NM_032746.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96IX9.1 GenPept UniProtKB/Swiss-Prot:Q96IX9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials