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    LOC105372045 uncharacterized LOC105372045 [ Homo sapiens (human) ]

    Gene ID: 105372045, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105372045
    Gene description
    uncharacterized LOC105372045
    See related
    Ensembl:ENSG00000287803
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    18q12.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (29629842..29651441)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (29819583..29841159)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372044 Neighboring gene heat shock protein family A (Hsp70) member 9 pseudogene 2 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:26936216-26937415 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr18:26978329-26979528 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:27081874-27083073 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:27442606-27443336 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr18:27453088-27454287 Neighboring gene uncharacterized LOC124904344 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:27755683-27755874 Neighboring gene MPRA-validated peak3089 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:27868886-27869471 Neighboring gene microRNA 302f

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      29629842..29651441
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_935329.4 RNA Sequence

      Related
      ENST00000666254.1

    2. XR_935330.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      29819583..29841159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007088621.1 RNA Sequence

    2. XR_007088622.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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