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    LOC101927213 uncharacterized LOC101927213 [ Homo sapiens (human) ]

    Gene ID: 101927213, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101927213
    Gene description
    uncharacterized LOC101927213
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    2p16.1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (56585920..56649188)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (56582916..56646197)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374690 Neighboring gene uncharacterized LOC100129434 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11502 Neighboring gene coiled-coil domain containing 85A Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:56514747-56515946 Neighboring gene RNA, 5S ribosomal pseudogene 93 Neighboring gene peptidylprolyl isomerase A pseudogene 63 Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      56585920..56649188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001739478.1 RNA Sequence

    2. XR_001739480.1 RNA Sequence

    3. XR_001739479.1 RNA Sequence

    4. XR_001739481.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      56582916..56646197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072089.1 RNA Sequence

    2. XR_007072091.1 RNA Sequence

    3. XR_007072090.1 RNA Sequence

    4. XR_007072092.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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