U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from dbVar

    • Showing Current items.

    CHMP1B2P charged multivesicular body protein 1B2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 101060146, updated on 16-Jan-2024

    Summary

    Official Symbol
    CHMP1B2Pprovided by HGNC
    Official Full Name
    charged multivesicular body protein 1B2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:49380
    See related
    Ensembl:ENSG00000293469 AllianceGenome:HGNC:49380
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in adrenal (RPKM 1.1), prostate (RPKM 0.7) and 13 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    Xq21.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (80228489..80335318, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (78661052..78768028, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (79483988..79590817, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373282 Neighboring gene NANOG hESC enhancer GRCh37_chrX:78856708-78857363 Neighboring gene TBX22 P0 promoter Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:79277949-79278449 Neighboring gene T-box transcription factor 22 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:79471575-79472774 Neighboring gene Sharpr-MPRA regulatory region 5203 Neighboring gene terminal nucleotidyltransferase 5D Neighboring gene heterogeneous nuclear ribonucleoprotein H3 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_110646.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL158140, AL591431
      Related
      ENST00000614414.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      80228489..80335318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      78661052..78768028 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)