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    IGKV1ORY-1 immunoglobulin kappa variable 1/ORY-1 (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 439957, updated on 10-Oct-2023

    Summary

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    Official Symbol
    IGKV1ORY-1provided by HGNC
    Official Full Name
    immunoglobulin kappa variable 1/ORY-1 (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:37729
    See related
    Ensembl:ENSG00000271375 IMGT/GENE-DB:IGKV1/ORY-1; AllianceGenome:HGNC:37729
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    IGKV1/ORY-1
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    Genomic context

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    Location:
    Yq11.21
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (11473762..11474238, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (11695111..11695587, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (13629438..13629914, complement)

    Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene CHEK2 pseudogene 1 Neighboring gene MT-ND1 pseudogene 12 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13643820-13644423 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13648683-13649233 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13649367-13649930 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13650329-13651026 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13658561-13659553 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13705193-13705723 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13705724-13706253 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13717077-13717586 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13800862-13801435 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13801979-13802577 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13802634-13803513 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13804526-13805100 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13808039-13808988 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13809373-13809948 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13809949-13810523 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:13842212-13842741 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:13842742-13843270 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13843290-13844258 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13850673-13851318 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:13851319-13851964 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:13851965-13852609 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13856042-13857000 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13857207-13857742 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrY:13857743-13858278 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrY:13866363-13867346 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrY:13867347-13868330 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrY:13868331-13869314 Neighboring gene regulator of chromosome condensation 2 pseudogene 1 Neighboring gene argininosuccinate synthetase 1 pseudogene 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_065960.1 

      Range
      101..577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

      Range
      11473762..11474238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060948.1 Alternate T2T-CHM13v2.0

      Range
      11695111..11695587 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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