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    LOC100129344 developmental pluripotency associated 4 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100129344, updated on 10-Oct-2023

    Summary

    Gene symbol
    LOC100129344
    Gene description
    developmental pluripotency associated 4 pseudogene
    See related
    Ensembl:ENSG00000248777
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC100129344 in Genome Data Viewer
    Location:
    4p16.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (10199829..10200595, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (10199064..10199830, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (10201453..10202219, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene WD repeat domain 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:10117280-10118084 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15278 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15279 Neighboring gene uncharacterized LOC124900666 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21310 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21311 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:10124378-10124878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:10124879-10125379 Neighboring gene RNA, 5S ribosomal pseudogene 155 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:10130393-10131592 Neighboring gene CRISPRi-validated cis-regulatory element chr4.979 Neighboring gene RAF1 pseudogene 1 Neighboring gene MX dynamin like GTPase 1 pseudogene

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_022004.1 

      Range
      101..867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      10199829..10200595 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      10199064..10199830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)