U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from dbVar

    • Showing Current items.

    LOC112268263 uncharacterized LOC112268263 [ Homo sapiens (human) ]

    Gene ID: 112268263, updated on 10-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC112268263
    Gene description
    uncharacterized LOC112268263
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    1p32.1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (58713056..58760197)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (58628490..58638639)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene adenylate kinase 2 pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 3519 Neighboring gene Myb like, SWIRM and MPN domains 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1086 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1087 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:59169902-59170744 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:59192522-59193721 Neighboring gene uncharacterized LOC124904191 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:59215043-59215253 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:59220674-59221873 Neighboring gene uncharacterized LOC105378751 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1088 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1089 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:59247516-59247691 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1090 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 934 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:59249417-59250164 Neighboring gene Jun proto-oncogene, AP-1 transcription factor subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      58713056..58760197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007066129.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      58628490..58638639
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007070254.1 RNA Sequence

    2. XR_007070255.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases