U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from dbVar

    • Showing Current items.

    LOC101928359 uncharacterized LOC101928359 [ Homo sapiens (human) ]

    Gene ID: 101928359, updated on 10-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101928359
    Gene description
    uncharacterized LOC101928359
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward heart (RPKM 4.8) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    Xq25
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (122422006..122478081)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (120721932..120777922)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:121037788-121038370 Neighboring gene TPT1 pseudogene 13 Neighboring gene UBE2V1 pseudogene 16 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:121247261-121247762 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121353508-121354124 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121354125-121354740 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121354741-121355356 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121356589-121357204 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121357821-121358436 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121355973-121356588 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:121355357-121355972 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:121360906-121361627 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:121370610-121371361 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:121371648-121372847 Neighboring gene MPRA-validated peak7420 silencer Neighboring gene ribosomal protein L3 pseudogene 12 Neighboring gene small nucleolar RNA U3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    Variation

    Go to the top of the page Help

    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      122422006..122478081
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001755950.2 RNA Sequence

    2. XR_001755951.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      120721932..120777922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007091085.1 RNA Sequence

    2. XR_007091086.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases