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    LOC105376755 uncharacterized LOC105376755 [ Homo sapiens (human) ]

    Gene ID: 105376755, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105376755
    Gene description
    uncharacterized LOC105376755
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105376755 in Genome Data Viewer
    Location:
    2q32.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (194726172..195399504, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (195211455..195883888, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene COBW domain containing 7 pseudogene Neighboring gene small nucleolar RNA SNORD59 Neighboring gene NANOG hESC enhancer GRCh37_chr2:195627401-195627902 Neighboring gene long intergenic non-protein coding RNA 1790 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:195768635-195768838 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:195937963-195938515 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:196077215-196077824 Neighboring gene uncharacterized LOC105373817 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:196278375-196278874 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:196304790-196305290 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:196380116-196380616 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:196387673-196388174 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:196388175-196388674 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16887 Neighboring gene RNA, U6 small nuclear 169, pseudogene Neighboring gene long intergenic non-protein coding RNA 1825

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      194726172..195399504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007088699.1 RNA Sequence

    2. XR_001739835.1 RNA Sequence

    3. XR_001739834.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      195211455..195883888 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007071693.1 RNA Sequence

    2. XR_007071692.1 RNA Sequence

    3. XR_007071691.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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