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    LINC02277 long intergenic non-protein coding RNA 2277 [ Homo sapiens (human) ]

    Gene ID: 107984027, updated on 10-Oct-2023

    Summary

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    Official Symbol
    LINC02277provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2277provided by HGNC
    Primary source
    HGNC:HGNC:53193
    See related
    AllianceGenome:HGNC:53193
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    14q21.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (44392531..44481886, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (38580174..38673308, complement)

    Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2307 Neighboring gene chromosome 11 open reading frame 58 pseudogene Neighboring gene MPRA-validated peak2140 silencer Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr14:44785502-44786701 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1 Neighboring gene MPRA-validated peak2143 silencer Neighboring gene Sharpr-MPRA regulatory region 10127 Neighboring gene MPRA-validated peak2144 silencer Neighboring gene uncharacterized LOC105370473 Neighboring gene fibrous sheath CABYR binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

      Range
      44392531..44481886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001750743.3 RNA Sequence

    2. XR_001750744.3 RNA Sequence

    3. XR_002957611.2 RNA Sequence

    4. XR_001750745.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060938.1 Alternate T2T-CHM13v2.0

      Range
      38580174..38673308 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007084659.1 RNA Sequence

    2. XR_007084657.1 RNA Sequence

    3. XR_007084658.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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