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    LOC105369844 uncharacterized LOC105369844 [ Homo sapiens (human) ]

    Gene ID: 105369844, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC105369844
    Gene description
    uncharacterized LOC105369844
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC105369844 in Genome Data Viewer
    Location:
    12q21.2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (75524261..75834768, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (75498939..75813639, complement)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4662 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:75880921-75881422 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:75881423-75881922 Neighboring gene GLIPR1 antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:75904602-75905146 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:75905147-75905690 Neighboring gene GLI pathogenesis related 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:75916502-75917002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:75917003-75917503 Neighboring gene KRR1 small subunit processome component homolog Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:76026122-76026705 Neighboring gene Sharpr-MPRA regulatory region 10558 Neighboring gene MPRA-validated peak1837 silencer Neighboring gene phosphogluconate dehydrogenase pseudogene 2 Neighboring gene uncharacterized LOC107984533 Neighboring gene uncharacterized LOC124900321 Neighboring gene NANOG hESC enhancer GRCh37_chr12:76105024-76105525 Neighboring gene ribosomal protein L10 pseudogene 13 Neighboring gene NANOG hESC enhancer GRCh37_chr12:76140468-76140969 Neighboring gene uncharacterized LOC105369846 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4663 Neighboring gene Sharpr-MPRA regulatory region 6163 Neighboring gene Sharpr-MPRA regulatory region 12950 Neighboring gene Sharpr-MPRA regulatory region 14186 Neighboring gene Sharpr-MPRA regulatory region 2424 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:76351262-76352207 Neighboring gene NOP10 ribonucleoprotein homolog (yeast) pseudogene Neighboring gene RNA, 7SL, cytoplasmic 734, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      75524261..75834768 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007063375.1 RNA Sequence

    2. XR_007063374.1 RNA Sequence

    3. XR_007063376.1 RNA Sequence

    4. XR_007063377.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      75498939..75813639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007082855.1 RNA Sequence

    2. XR_007082854.1 RNA Sequence

    3. XR_007082856.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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