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    LOC105377635 uncharacterized LOC105377635 [ Homo sapiens (human) ]

    Gene ID: 105377635, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105377635
    Gene description
    uncharacterized LOC105377635
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    2p11.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (87349160..87358735)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (87354792..87364367)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ig kappa chain V-III region VH-like pseudogene Neighboring gene uncharacterized LOC124907854 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:91757725-91758235 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87581544-87582388 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87582389-87583233 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87623699-87624202 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87624203-87624704 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87633283-87633789 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87633790-87634295 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87641303-87641844 Neighboring gene OCT4-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87641845-87642385 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87642477-87643119 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87643890-87644537 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87643120-87643761 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87644538-87645184 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87645185-87645831 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87645832-87646477 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:87720936-87721436 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87647813-87648776 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87648777-87649739 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87724395-87725207 Neighboring gene long intergenic non-protein coding RNA 1943 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:87756227-87756812 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:87762086-87762942 Neighboring gene uncharacterized LOC124906032 Neighboring gene cytoskeleton regulator RNA Neighboring gene NK cell activity associated lncRNA 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      87349160..87358735
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_940325.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      87354792..87364367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007072256.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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