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    MGC4859 uncharacterized LOC79150 [ Homo sapiens (human) ]

    Gene ID: 79150, updated on 10-Oct-2023

    Summary

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    Gene symbol
    MGC4859
    Gene description
    uncharacterized LOC79150
    See related
    Ensembl:ENSG00000283117
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    7p21.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (10449820..10779944, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (10580118..10910539, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (10489447..10819571, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375150 Neighboring gene MPRA-validated peak6380 silencer Neighboring gene small nucleolar RNA U3 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:10504318-10505228 Neighboring gene cyclin dependent kinase 2 associated protein 2 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:10516262-10516903 Neighboring gene heat shock protein family A (Hsp70) member 8 pseudogene 8 Neighboring gene MPRA-validated peak6383 silencer Neighboring gene uncharacterized LOC124901588 Neighboring gene uncharacterized LOC107986766 Neighboring gene VISTA enhancer hs793 Neighboring gene MPRA-validated peak6384 silencer Neighboring gene uncharacterized LOC124900231 Neighboring gene MPRA-validated peak6385 silencer Neighboring gene uncharacterized LOC100131472 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:10763070-10763266 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:10781799-10782298 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:10948792-10949324 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:10979917-10980837 Neighboring gene uncharacterized LOC107986767 Neighboring gene NDUFA4 mitochondrial complex associated

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_147499.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC002644
      Related
      ENST00000634803.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      10449820..10779944 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      10580118..10910539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_024304.1: Suppressed sequence

      Description
      NM_024304.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

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