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    LOC105373240 uncharacterized LOC105373240 [ Homo sapiens (human) ]

    Gene ID: 105373240, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105373240
    Gene description
    uncharacterized LOC105373240
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    Xq12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (66757136..66780371)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (65185975..65209246)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20884 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29722 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:65855165-65856364 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29723 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29724 Neighboring gene ectodysplasin A2 receptor Neighboring gene RNA, U6 small nuclear 394, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:65937581-65938780 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20885 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:66313769-66314348 Neighboring gene zinc finger protein 681 pseudogene Neighboring gene poly(A) binding protein nuclear 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      66757136..66780371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_938422.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      65185975..65209246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007091202.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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