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    LOC105375487 uncharacterized LOC105375487 [ Homo sapiens (human) ]

    Gene ID: 105375487, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105375487
    Gene description
    uncharacterized LOC105375487
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    7q31.33
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (125845213..125854046, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (127162480..127171314, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928283 Neighboring gene uncharacterized LOC100506664 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:125106413-125106644 Neighboring gene PPIA pseudogene 93 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:125175027-125175230 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:125549855-125550449 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:125555064-125555651 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:125555652-125556238 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:125563618-125564252 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26574 Neighboring gene uncharacterized LOC105375488 Neighboring gene uncharacterized LOC101928357 Neighboring gene poly(A) binding protein cytoplasmic 4 pseudogene Neighboring gene glutamate metabotropic receptor 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      125845213..125854046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_927933.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      127162480..127171314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007077853.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases