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    ZRANB2-DT ZRANB2 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 100852410, updated on 10-Oct-2023

    Summary

    Official Symbol
    ZRANB2-DTprovided by HGNC
    Official Full Name
    ZRANB2 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:43595
    See related
    AllianceGenome:HGNC:43595
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZRANB2-AS2
    Expression
    Broad expression in testis (RPKM 1.3), thyroid (RPKM 0.5) and 19 other tissues See more
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    Genomic context

    See ZRANB2-DT in Genome Data Viewer
    Location:
    1p31.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (71081324..71237723)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (70959331..71115774)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (71547007..71703406)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene prostaglandin E receptor 3 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:71512913-71513496 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 991 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1198 Neighboring gene ZRANB2 antisense RNA 1 Neighboring gene uncharacterized LOC105378795 Neighboring gene zinc finger RANBP2-type containing 2 Neighboring gene microRNA 186 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:71927989-71928559 Neighboring gene neuronal growth regulator 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:72203394-72203980 Neighboring gene NEGR1 intronic transcript 1 Neighboring gene NANOG hESC enhancer GRCh37_chr1:72328413-72328914 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:72466099-72467298 Neighboring gene GDP dissociation inhibitor 2 pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Other Names

    • ZRANB2 antisense RNA 2 (head to head)
    • ZRANB2 antisense RNA 2 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046217.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC054887, BM766420

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      71081324..71237723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      70959331..71115774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)