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    MTCO1P40 MT-CO1 pseudogene 40 [ Homo sapiens (human) ]

    Gene ID: 107075172, updated on 10-Oct-2023

    Summary

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    Official Symbol
    MTCO1P40provided by HGNC
    Official Full Name
    MT-CO1 pseudogene 40provided by HGNC
    Primary source
    HGNC:HGNC:52105
    See related
    Ensembl:ENSG00000262902 AllianceGenome:HGNC:52105
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    Location:
    17q22
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (53105734..53106358)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (53980967..53981591)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (51183095..51183719)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984983 Neighboring gene long intergenic non-protein coding RNA 2876 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:51123434-51123934 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr17:51138562-51139451 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:51219872-51220372 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr17:51220373-51220873 Neighboring gene tubulin beta 6 class V pseudogene Neighboring gene phosphatidylinositol 4-kinase type 2 alpha pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    General gene information

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    Other Names

    • mitochondrially encoded cytochrome c oxidase I pseudogene 40

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_054740.1 

      Range
      101..725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

      Range
      53105734..53106358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060941.1 Alternate T2T-CHM13v2.0

      Range
      53980967..53981591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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