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    LOC107984449 uncharacterized LOC107984449 [ Homo sapiens (human) ]

    Gene ID: 107984449, updated on 14-Mar-2024

    Summary

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    Gene symbol
    LOC107984449
    Gene description
    uncharacterized LOC107984449
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    all
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    Genomic context

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    See LOC107984449 in Genome Data Viewer
    Location:
    12q24.32
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (127060501..127158030)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2405 Neighboring gene heat shock protein family E (Hsp10) member 1 pseudogene 20 Neighboring gene uncharacterized LOC105370063 Neighboring gene MPRA-validated peak2032 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7324 Neighboring gene MPRA-validated peak2033 silencer Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:127584370-127584913 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr12:127610351-127611550 Neighboring gene NANOG hESC enhancer GRCh37_chr12:127618456-127618957 Neighboring gene uncharacterized LOC107984450 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:127630723-127631400 Neighboring gene uncharacterized LOC105370062 Neighboring gene uncharacterized LOC105370064 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:127683373-127683523 Neighboring gene MPRA-validated peak2034 silencer Neighboring gene uncharacterized LOC124903049

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000012.12 Chromosome 12 Reference GRCh38.p14 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC107984449

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      127060501..127158030
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047429960.1 → XP_047285916.1  uncharacterized protein LOC107984449

    2. XM_024449289.2 → XP_024305057.1  uncharacterized protein LOC107984449

    3. XM_047429961.1 → XP_047285917.1  uncharacterized protein LOC107984449

    4. XM_024449290.2 → XP_024305058.1  uncharacterized protein LOC107984449

    RNA

    1. XR_007063517.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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