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    LOC105377861 uncharacterized LOC105377861 [ Homo sapiens (human) ]

    Gene ID: 105377861, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105377861
    Gene description
    uncharacterized LOC105377861
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105377861 in Genome Data Viewer
    Location:
    6q14.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (76694366..76727276, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (77871461..77904334, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2540 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:77270552-77271091 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:77271631-77272170 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:77272171-77272708 Neighboring gene RNA, U6 small nuclear 84, pseudogene Neighboring gene 52 kDa repressor of the inhibitor of the protein kinase-like Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:77413212-77414041 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94632 Neighboring gene NANOG hESC enhancer GRCh37_chr6:77418612-77419138 Neighboring gene uncharacterized LOC105377862 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94698 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:77559139-77559770 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:77585912-77586484 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94761 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94782 Neighboring gene uncharacterized LOC124901345 Neighboring gene uncharacterized LOC101928570 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95009 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95029 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:77883629-77884129

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      76694366..76727276 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_942697.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      77871461..77904334 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007076904.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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