U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from dbVar

    • Showing Current items.

    LOC101928570 uncharacterized LOC101928570 [ Homo sapiens (human) ]

    Gene ID: 101928570, updated on 17-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101928570
    Gene description
    uncharacterized LOC101928570
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101928570 in Genome Data Viewer
    Location:
    6q14.1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (77068664..77317479, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (78234422..78494930, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377861 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:77413212-77414041 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94632 Neighboring gene NANOG hESC enhancer GRCh37_chr6:77418612-77419138 Neighboring gene uncharacterized LOC105377862 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94698 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:77559139-77559770 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:77585912-77586484 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94761 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_94782 Neighboring gene uncharacterized LOC124901345 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95009 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95029 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:77883629-77884129 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95189 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_95197 Neighboring gene uncharacterized LOC105377864 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:78172074-78172218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24763 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24764 Neighboring gene uncharacterized LOC124901493 Neighboring gene 5-hydroxytryptamine receptor 1B Neighboring gene ribosomal protein S6 pseudogene 7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Phenotypes

    Go to the top of the page Help

    Review eQTL and phenotype association data in this region using PheGenI

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      77068664..77317479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_241864.5 RNA Sequence

    2. XR_007059650.1 RNA Sequence

    3. XR_001744206.2 RNA Sequence

    4. XR_001744207.2 RNA Sequence

    5. XR_001744205.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      78234422..78494930 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007076908.1 RNA Sequence

    2. XR_007076906.1 RNA Sequence

    3. XR_007076907.1 RNA Sequence

    4. XR_007076909.1 RNA Sequence

    5. XR_007076905.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials