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    LOC105377350 uncharacterized LOC105377350 [ Homo sapiens (human) ]

    Gene ID: 105377350, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC105377350
    Gene description
    uncharacterized LOC105377350
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    4q24
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (104280103..104394411, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (107591321..107705587, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:104867518-104868402 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:104868403-104869285 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:104869315-104869938 Neighboring gene RNA, U6 small nuclear 635, pseudogene Neighboring gene long intergenic non-protein coding RNA 2503 Neighboring gene Sharpr-MPRA regulatory region 10992 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:105169645-105170166 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:105170167-105170687 Neighboring gene uncharacterized LOC124900744 Neighboring gene VISTA enhancer hs260 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21764 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21765 Neighboring gene CXXC4 antisense RNA 1 Neighboring gene CXXC finger protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      104280103..104394411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_939033.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      107591321..107705587 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007074849.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases