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    LOC105377254 uncharacterized LOC105377254 [ Homo sapiens (human) ]

    Gene ID: 105377254, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC105377254
    Gene description
    uncharacterized LOC105377254
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105377254 in Genome Data Viewer
    Location:
    4q13.1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (63761544..63794955)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (67198549..67231915)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene LARP1B pseudogene 1 Neighboring gene uncharacterized LOC105377253 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21593 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:64849662-64850253 Neighboring gene NANOG hESC enhancer GRCh37_chr4:65022490-65023001 Neighboring gene uncharacterized LOC124900851 Neighboring gene trans-2,3-enoyl-CoA reductase like Neighboring gene RNA, U6 small nuclear 191, pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      63761544..63794955
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_938827.1 RNA Sequence

    2. XR_938820.2 RNA Sequence

    3. XR_938821.2 RNA Sequence

    4. XR_938819.2 RNA Sequence

    5. XR_938825.2 RNA Sequence

    6. XR_938826.2 RNA Sequence

    7. XR_938822.2 RNA Sequence

    8. XR_938824.2 RNA Sequence

    9. XR_938823.3 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      67198549..67231915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007075327.1 RNA Sequence

    2. XR_007075322.1 RNA Sequence

    3. XR_007075324.1 RNA Sequence

    4. XR_007075319.1 RNA Sequence

    5. XR_007075325.1 RNA Sequence

    6. XR_007075326.1 RNA Sequence

    7. XR_007075320.1 RNA Sequence

    8. XR_007075323.1 RNA Sequence

    9. XR_007075321.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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