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    LOC105376634 uncharacterized LOC105376634 [ Homo sapiens (human) ]

    Gene ID: 105376634, updated on 17-Sep-2024

    Summary

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    Gene symbol
    LOC105376634
    Gene description
    uncharacterized LOC105376634
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC105376634 in Genome Data Viewer
    Location:
    11p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (38191142..38337295, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (38335728..38481762, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7a pseudogene 56 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:37880455-37881030 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37913389-37913890 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:37989075-37989576 Neighboring gene NANOG hESC enhancer GRCh37_chr11:37990791-37991343 Neighboring gene long intergenic non-protein coding RNA 2760 Neighboring gene NANOG hESC enhancer GRCh37_chr11:38070931-38071450 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:38132226-38133425 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38134504-38135142 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:38173897-38174616 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr11:38190669-38191868 Neighboring gene DNAAF11 pseudogene 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:38272133-38272636 Neighboring gene MPRA-validated peak1259 silencer Neighboring gene MED14-independent group 3 enhancer GRCh37_chr11:38615819-38617018 Neighboring gene uncharacterized LOC105376635 Neighboring gene long intergenic non-protein coding RNA 2759 Neighboring gene long intergenic non-protein coding RNA 1493

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      38191142..38337295 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_931202.2 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      38335728..38481762 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007082485.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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